bgc_data_processing

Biogeochemical Data Processing module for Python

bgc-data-processing is a module to preprocess and analyze Biogeochemical Data with standard formats (CSV, NetCDF...).

This module provides tools to:

• Preprocess Data from different sources
• Save preprocessed data under a standardized format
• Read preprocessed data and perform some analysis on it (visual validation, water mass comparison...)

All docstrings examples will assume that bgc_data_processing has been imported as bgc_dp:

>>> import bgc_data_processing as bgc_dp

From this namespace are accessible:

• Constraints -> Constraints object to slice storers
• DataSource -> Providers defining object
• SelectiveDataSource -> Selective loader
• SourceVariableSet -> Set of variables to pass to datasource
• Storer -> Biogeochemical data and metadat storer
• WaterMass -> Water mass defining object
• comparison -> Comparison tools to compare observations to simulations
• dateranges -> Daterange-related objects
• defaults -> Defaults objects parsed from the configuration files
• exceptions -> Exceptions fro the project
• features -> Features to compute new variables
• io -> Input/Output tools
• metrics -> Comparison metrics
• parsers -> Configuartion parsing objects
• providers -> Providers loaders
• savers -> Saving objects
• set_verbose_level -> Set the verbose level
• tracers -> Plotting objects
• units -> Unit conversion
• utils -> Utilities
• variables -> Variables-related objects
• water_masses -> Water mass definition