bgc_data_processing.providers.hycom

Specific parameters to load Argo-provided data.

loader = DataSource(provider_name='HYCOM', data_format='abfiles', dirin=Path(PROVIDERS_CONFIG['HYCOM']['PATH']), data_category=PROVIDERS_CONFIG['HYCOM']['CATEGORY'], excluded_files=PROVIDERS_CONFIG['HYCOM']['EXCLUDE'], files_pattern=FileNamePattern('archm.{years}_[0-9]*_[0-9]*.a'), variable_ensemble=SourceVariableSet(provider=VARS['provider'].not_in_file().set_default('HYCOM'), expocode=VARS['expocode'].not_in_file(), date=VARS['date'].not_in_file(), year=VARS['year'].not_in_file(), month=VARS['month'].not_in_file(), day=VARS['day'].not_in_file(), hour=VARS['hour'].not_in_file(), longitude=VARS['longitude'].in_file_as('plon'), latitude=VARS['latitude'].in_file_as('plat'), depth=VARS['depth'].in_file_as('thknss'), temperature=VARS['temperature'].in_file_as('temp'), salinity=VARS['salinity'].in_file_as('salin'), oxygen=VARS['oxygen'].in_file_as('ECO_oxy'), phosphate=VARS['phosphate'].in_file_as('ECO_pho').correct_with(units.convert_phosphate_mgc_by_m3_to_umol_by_l), nitrate=VARS['nitrate'].in_file_as('ECO_no3').correct_with(units.convert_nitrate_mgc_by_m3_to_umol_by_l), silicate=VARS['silicate'].in_file_as('ECO_sil').correct_with(units.convert_silicate_mgc_by_m3_to_umol_by_l), chlorophyll=FeatureVar(ChlorophyllFromDiatomFlagellate.copy_var_infos_from_template(template=VARS['chlorophyll'], diatom_variable=VARS['diatom'].in_file_as('ECO_diac'), flagellate_variable=VARS['flagellate'].in_file_as('ECO_flac')))), grid_basename=PROVIDERS_CONFIG['HYCOM']['REGIONAL_GRID_BASENAME']) module-attribute